Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001574annotation not available (84 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.988
ENSSDAP00000013185
annotation not available
   
 0.988
ENSSDAP00000022620
annotation not available
   
 0.986
ENSSDAP00000007097
annotation not available
   
 0.985
RPS16
Ribosomal protein S16.
   
 0.984
RPS11
Ribosomal protein S11.
   
 0.984
ENSSDAP00000013475
annotation not available
   
 0.984
ENSSDAP00000024623
annotation not available
   
 0.984
RPS14
Ribosomal protein S14.
   
 0.980
RPS5
Ribosomal protein S5.
   
 0.980
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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