STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS12ADAM metallopeptidase with thrombospondin type 1 motif 12. (1518 aa)    
Predicted Functional Partners:
ENSSDAP00000022058
annotation not available
    
 0.958
USF2
Upstream transcription factor 2, c-fos interacting.
    
 
 0.957
USF1
Upstream transcription factor 1.
   
 
 0.953
COMP
Cartilage oligomeric matrix protein.
    
 0.943
ADAMTS6
ADAM metallopeptidase with thrombospondin type 1 motif 6.
    
 0.936
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
    
 
 0.907
SNRK
SNF related kinase.
    
 
 0.851
MYL6
Myosin light chain 6.
    
   0.845
ENSSDAP00000013720
annotation not available
    
   0.845
FKBP9
FKBP prolyl isomerase 9.
    
   0.810
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.