Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001580annotation not available (455 aa)    
Predicted Functional Partners:
NCOA5
Nuclear receptor coactivator 5.
   
 
 0.776
NUP98
Nucleoporin 98.
   
 
 0.776
ENSSDAP00000025972
annotation not available
   
 
 0.702
ENSSDAP00000026467
annotation not available
   
 
 0.702
NDC1
NDC1 transmembrane nucleoporin.
     
 0.686
NUP93
Nucleoporin 93.
   
 0.677
NUP155
Nucleoporin 155.
    
  0.655
NUP205
Nucleoporin 205.
    
  0.655
NUP35
Nucleoporin 35.
   
 
 0.646
NUP50
Nucleoporin 50.
   
 
 0.643
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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