Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001644annotation not available (64 aa)    
Predicted Functional Partners:
POLR2E
RNA polymerase II subunit E.
  
 0.999
POLR2C
RNA polymerase II subunit C.
  
 0.999
POLR2F
RNA polymerase II subunit F.
  
 0.999
POLR2G
RNA polymerase II subunit G.
   
 0.998
POLR2I
RNA polymerase II subunit I.
   
 0.998
POLR1C
RNA polymerase I and III subunit C.
  
 0.998
ENSSDAP00000003405
annotation not available
    
 0.996
ENSSDAP00000011558
annotation not available
   
 0.995
ENSSDAP00000015257
annotation not available
   
 0.995
POLR2D
RNA polymerase II subunit D.
   
 0.995
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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