Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001655annotation not available (149 aa)    
Predicted Functional Partners:
ENSSDAP00000026880
annotation not available
     
  0.850
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
     
  0.841
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
     
  0.841
MICALL2
MICAL like 2.
     
  0.821
ENSSDAP00000004592
annotation not available
     
  0.810
CCNO
Cyclin O.
      
 0.645
EIF3L
Eukaryotic translation initiation factor 3 subunit L.
     
  0.636
ENSSDAP00000008718
annotation not available
     
  0.591
ENSSDAP00000009344
annotation not available
     
  0.591
ENSSDAP00000009386
annotation not available
     
  0.591
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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