Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001658annotation not available (100 aa)    
Predicted Functional Partners:
IKZF3
IKAROS family zinc finger 3.
    
 
 0.955
IKZF1
IKAROS family zinc finger 1.
    
 
 0.955
IKZF4
IKAROS family zinc finger 4.
    
 
 0.933
IKZF2
IKAROS family zinc finger 2.
    
 
 0.916
ENSSDAP00000012569
annotation not available
    
  0.889
TADA2A
Transcriptional adaptor 2A.
    
   0.850
KAT2A
Lysine acetyltransferase 2A.
    
  0.838
TADA3
Transcriptional adaptor 3.
    
   0.747
YEATS2
YEATS domain containing 2.
    
 
 0.740
PIDD1
P53-induced death domain protein 1.
    
 0.688
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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