Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIN4Peptidylprolyl cis/trans isomerase, NIMA-interacting 4. (129 aa)    
Predicted Functional Partners:
POLR2D
RNA polymerase II subunit D.
   
 
 0.753
NHSL2
NHS like 2.
      
 0.707
SYAP1
Synapse associated protein 1.
    
   0.704
PPIL1
Peptidylprolyl isomerase like 1.
  
 0.703
ENSSDAP00000006050
annotation not available
    
 
 0.690
GPHN
Gephyrin.
  
 
 0.685
SSBP1
Single stranded DNA binding protein 1.
  
  
 0.683
TP63
Tumor protein p63.
    
  0.666
TP53
Tumor protein p53.
    
  0.666
ENSSDAP00000025982
annotation not available
    
  0.666
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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