Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLXNB3Plexin B3. (1824 aa)    
Predicted Functional Partners:
RND1
Rho family GTPase 1.
    
 0.998
SEMA4D
Semaphorin 4D.
    
 0.997
MET
MET proto-oncogene, receptor tyrosine kinase.
    
0.995
RND3
Rho family GTPase 3.
    
 0.990
ARHGEF11
Rho guanine nucleotide exchange factor 11.
    
 0.989
ARHGEF12
Rho guanine nucleotide exchange factor 12.
    
 0.981
SEMA4C
Semaphorin 4C.
    
 0.980
SEMA4A
Semaphorin 4A.
    
 0.979
SEMA4F
Ssemaphorin 4F.
    
 0.977
SEMA4G
Semaphorin 4G.
    
 0.977
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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