Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001798annotation not available (139 aa)    
Predicted Functional Partners:
TPD52L2
TPD52 like 2.
    
   0.926
TPD52
Tumor protein D52.
    
   0.926
TPD52L1
TPD52 like 1.
    
 
 0.923
GABPB1
GA binding protein transcription factor subunit beta 1.
    
  0.890
GABPA
GA binding protein transcription factor subunit alpha.
    
   0.755
ENSSDAP00000019473
annotation not available
     
 0.638
ENSSDAP00000019490
annotation not available
     
 0.638
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
     
 0.542
ENSSDAP00000002477
annotation not available
     
  0.529
IGF2R
Insulin like growth factor 2 receptor.
     
  0.508
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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