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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMB4Laminin subunit beta 4. (1737 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.901
PTK2
Protein tyrosine kinase 2.
    
  0.848
SV2C
Synaptic vesicle glycoprotein 2C.
    
  0.830
SV2A
Synaptic vesicle glycoprotein 2A.
    
  0.830
SV2B
Synaptic vesicle glycoprotein 2B.
    
  0.827
PTK2B
Protein tyrosine kinase 2 beta.
    
  0.807
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.805
RANBP2
RAN binding protein 2.
    
 0.739
ENSSDAP00000002367
annotation not available
    
 0.722
KDM6A
Lysine demethylase 6A.
    
 0.722
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.