Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001807annotation not available (552 aa)    
Predicted Functional Partners:
ENSSDAP00000024374
annotation not available
    
 0.855
SFTPD
Surfactant protein D.
    
 0.816
ENSSDAP00000021422
annotation not available
    
 0.729
ENSSDAP00000021432
annotation not available
    
 0.729
HBZ
Hemoglobin subunit zeta.
    
 0.725
HBE1
Hemoglobin subunit epsilon 1.
    
  0.659
HBQ1
Hemoglobin subunit theta 1.
    
 0.606
ENSSDAP00000000275
annotation not available
    
  0.579
ENSSDAP00000000311
annotation not available
    
  0.579
ENSSDAP00000000654
annotation not available
    
  0.579
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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