Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001896annotation not available (1219 aa)    
Predicted Functional Partners:
ENSSDAP00000001901
annotation not available
 
      0.894
SUOX
Sulfite oxidase.
     
  0.851
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.765
IFT57
Intraflagellar transport 57.
    
 0.764
IFT172
Intraflagellar transport 172.
    
 0.752
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.747
IFT140
Intraflagellar transport 140.
    
 0.679
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.674
IFT80
Intraflagellar transport 80.
    
 0.671
IFT81
Intraflagellar transport 81.
    
 0.661
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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