Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001909annotation not available (504 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.757
RAB14
RAB14, member RAS oncogene family.
    
 0.720
TREH
Trehalase.
   
  
 0.595
TYMS
Thymidylate synthetase.
    
 0.589
CYB5R4
Cytochrome b5 reductase 4.
     
 0.585
CSTF3
Cleavage stimulation factor subunit 3.
    
  0.571
RPS17
Ribosomal protein S17.
  
 
 0.563
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.561
TXNIP
Thioredoxin interacting protein.
    
 
 0.551
SLC22A8
Solute carrier family 22 member 8.
  
 
 0.550
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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