Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001929annotation not available (163 aa)    
Predicted Functional Partners:
ENSSDAP00000025822
annotation not available
   
   0.995
LRRC46
Leucine rich repeat containing 46.
   
 
 0.869
NME8
NME/NM23 family member 8.
    
 
 0.863
ENSSDAP00000006081
annotation not available
    
 0.862
SFI1
SFI1 centrin binding protein.
    
 0.862
ENSSDAP00000020753
annotation not available
    
 0.855
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.853
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.853
DEUP1
Deuterosome assembly protein 1.
    
 0.845
ENY2
ENY2 transcription and export complex 2 subunit.
   
 
 0.840
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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