Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001933annotation not available (108 aa)    
Predicted Functional Partners:
LMO2
LIM domain only 2.
    
 0.855
TCF12
Transcription factor 12.
    
 0.851
TCF4
Transcription factor 4.
    
 0.851
ENSSDAP00000007224
annotation not available
    
 0.846
LDB1
LIM domain binding 1.
    
 0.616
LDB2
LIM domain binding 2.
    
 0.614
LMO1
LIM domain only 1.
    
 0.581
LMO3
LIM domain only 3.
    
 0.522
RUNX2
RUNX family transcription factor 2.
    
 0.507
ENSSDAP00000009488
annotation not available
    
 0.507
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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