Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000001985annotation not available (350 aa)    
Predicted Functional Partners:
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.987
ENSSDAP00000011364
annotation not available
   
 0.986
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.981
ENSSDAP00000024732
annotation not available
   
 0.981
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.978
ENSSDAP00000004093
annotation not available
   
 0.975
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.975
ENSSDAP00000027454
annotation not available
   
 0.975
ENSSDAP00000005942
annotation not available
   
 0.974
ENSSDAP00000008700
annotation not available
   
 0.974
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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