Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP6V1FNBATP6V1F neighbor. (176 aa)    
Predicted Functional Partners:
TEKT5
Tektin 5.
    
 
 0.878
TEX49
Testis expressed 49.
  
 
   0.866
TEKT3
Tektin 3.
    
 
 0.861
ENSSDAP00000020753
annotation not available
    
   0.842
EFHC1
EF-hand domain containing 1.
    
 
 0.833
TEKT2
Tektin 2.
    
 
 0.813
CST11
Cystatin 11.
      
 0.808
EFHC2
EF-hand domain containing 2.
    
 
 0.806
EFHB
EF-hand domain family member B.
    
   0.803
TEX43
Testis expressed 43.
    
   0.803
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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