STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC1Small nuclear RNA activating complex polypeptide 1. (367 aa)    
Predicted Functional Partners:
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.999
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.999
ENSSDAP00000016584
annotation not available
    
 0.987
ENSSDAP00000026445
annotation not available
    
 0.987
GTF2B
General transcription factor IIB.
    
 0.982
TBP
TATA-box binding protein.
   
 0.978
ENSSDAP00000022985
annotation not available
    
 0.970
TBPL2
TATA-box binding protein like 2.
   
 0.947
GTF2A1
General transcription factor IIA subunit 1.
    
  0.941
TBPL1
TATA-box binding protein like 1.
   
 0.903
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.