Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000002010annotation not available (67 aa)    
Predicted Functional Partners:
NME8
NME/NM23 family member 8.
    
 0.603
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.596
GART
annotation not available
     
  0.536
ENSSDAP00000020635
annotation not available
    
  0.449
ENSSDAP00000020642
annotation not available
    
  0.449
ENSSDAP00000022525
annotation not available
  
     0.445
SPOP
Speckle type BTB/POZ protein.
   
  0.433
SPOPL
Speckle type BTB/POZ protein like.
   
  0.433
ARID4B
AT-rich interaction domain 4B.
    
 0.432
ARID4A
AT-rich interaction domain 4A.
    
 0.432
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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