Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MBTD1Mbt domain containing 1. (630 aa)    
Predicted Functional Partners:
ENSSDAP00000006960
annotation not available
    
 
 0.993
JAZF1
JAZF zinc finger 1.
    
 
 0.988
MEAF6
MYST/Esa1 associated factor 6.
    
 
 0.978
ING3
Inhibitor of growth family member 3.
   
 
 0.972
YEATS4
YEATS domain containing 4.
   
 
 0.966
BRD8
Bromodomain containing 8.
    
 
 0.966
MGA
MAX dimerization protein MGA.
   
 0.965
EPC2
Enhancer of polycomb homolog 2.
    
 
 0.964
KAT5
Lysine acetyltransferase 5.
    
 
 0.963
RUVBL2
RuvB like AAA ATPase 2.
    
 
 0.962
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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