Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATG13Autophagy related 13. (517 aa)    
Predicted Functional Partners:
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.999
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.999
ATG101
Autophagy related 101.
    
 0.999
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.997
C9orf72
C9orf72-SMCR8 complex subunit.
  
 
 0.997
ENSSDAP00000009406
annotation not available
    
 0.995
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.993
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.990
MTOR
Mechanistic target of rapamycin kinase.
    
 0.989
ENSSDAP00000011414
annotation not available
    
 0.986
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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