STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVILAdvillin. (819 aa)    
Predicted Functional Partners:
VIL1
Villin 1.
   
   0.956
ENSSDAP00000006870
annotation not available
   
   0.881
COG6
Component of oligomeric golgi complex 6.
   
 
 0.818
ENSSDAP00000026710
annotation not available
    
 
 0.815
COG3
Component of oligomeric golgi complex 3.
    
 
 0.813
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
  0.762
ARL1
ADP ribosylation factor like GTPase 1.
    
 
 0.756
SMIM7
Small integral membrane protein 7.
    
 
 0.725
ACTR3
Actin related protein 3.
    
 
 0.725
COG4
Component of oligomeric golgi complex 4.
    
 
 0.725
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.