Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRGNSerglycin. (159 aa)    
Predicted Functional Partners:
C1R
Complement C1r.
    
 0.664
ENSSDAP00000020311
annotation not available
    
 0.599
ENSSDAP00000021219
annotation not available
    
 0.599
ENSSDAP00000021720
annotation not available
    
 0.599
ENSSDAP00000027145
annotation not available
    
 0.599
EMP1
Epithelial membrane protein 1.
      
 0.581
COG1
Component of oligomeric golgi complex 1.
    
 
 0.549
MYOF
Myoferlin.
    
 
 0.548
SERPING1
Serpin family G member 1.
    
 0.528
PSMB8
Proteasome 20S subunit beta 8.
   
 
 0.526
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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