Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL5CADP ribosylation factor like GTPase 5C. (179 aa)    
Predicted Functional Partners:
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.833
COPB1
Coatomer protein complex subunit beta 1.
   
 0.816
COPB2
Coatomer protein complex subunit beta 2.
   
 0.814
PI4KB
Phosphatidylinositol 4-kinase beta.
    
 0.800
COPA
Coatomer protein complex subunit alpha.
    
 0.795
ITSN2
Intersectin 2.
    
 0.783
ENSSDAP00000012824
annotation not available
    
 0.781
ARFGAP2
ADP ribosylation factor GTPase activating protein 2.
    
 0.771
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
    
 0.771
BBS7
Bardet-Biedl syndrome 7.
    
 0.763
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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