STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC17DnaJ heat shock protein family (Hsp40) member C17. (303 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
    
 
 0.912
CWC15
CWC15 spliceosome associated protein homolog.
    
   0.902
XAB2
XPA binding protein 2.
   
 
 0.865
RAD1
RAD1 checkpoint DNA exonuclease.
    
 
 0.864
ENSSDAP00000005507
annotation not available
   
   0.861
IBTK
Inhibitor of Bruton tyrosine kinase.
      
 0.860
EXOG
Exo/endonuclease G.
   
   0.839
SYF2
SYF2 pre-mRNA splicing factor.
   
 
 0.828
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
   0.825
TRMT6
tRNA methyltransferase 6.
    
   0.802
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.