Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SKA1Spindle and kinetochore associated complex subunit 1. (258 aa)    
Predicted Functional Partners:
SKA3
Spindle and kinetochore associated complex subunit 3.
   
 0.994
NDC80
NDC80 kinetochore complex component.
   
 0.984
ENSSDAP00000022052
annotation not available
    
 0.982
ENSSDAP00000022338
annotation not available
    
 0.982
ENSSDAP00000023711
annotation not available
    
 0.982
PLK1
Polo like kinase 1.
   
 
 0.974
NUF2
NUF2 component of NDC80 kinetochore complex.
   
 0.969
ENSSDAP00000018707
annotation not available
    
 0.963
ENSSDAP00000023720
annotation not available
    
 0.963
ENSSDAP00000012078
annotation not available
   
 
 0.962
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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