STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000006798annotation not available (225 aa)    
Predicted Functional Partners:
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
    
  0.700
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
    
  0.692
ENSSDAP00000016017
annotation not available
    
  0.663
ENSSDAP00000023322
annotation not available
    
  0.663
ENSSDAP00000025742
annotation not available
    
  0.652
TRAV29DV5
T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene).
    
  0.651
ENSSDAP00000026058
annotation not available
   
  0.638
ENSSDAP00000027486
annotation not available
    
  0.629
ENSSDAP00000027487
annotation not available
    
  0.629
ENSSDAP00000020503
annotation not available
  
 
  0.619
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.