STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDAP00000008310annotation not available (208 aa)    
Predicted Functional Partners:
MLKL
Mixed lineage kinase domain like pseudokinase.
    
 0.837
VPS4B
Vacuolar protein sorting 4 homolog B.
     
 0.778
ENSSDAP00000026712
annotation not available
     
 0.778
CHMP4B
Charged multivesicular body protein 4B.
   
 
  0.774
CHMP4C
Charged multivesicular body protein 4C.
   
 
  0.774
ENSSDAP00000008146
annotation not available
    
 0.751
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.751
ENSSDAP00000004379
annotation not available
    
 0.672
RPS27A
Ribosomal protein S27a.
    
 0.672
ENSSDAP00000016414
annotation not available
    
 0.672
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.