STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPGN-methylpurine DNA glycosylase. (273 aa)    
Predicted Functional Partners:
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
    
 0.792
APEX2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
    
 0.760
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
    
 0.753
ENSSDAP00000003224
annotation not available
    
 0.753
ENSSDAP00000013836
annotation not available
    
 0.753
ENSSDAP00000014231
annotation not available
    
   0.697
MGMT
O-6-methylguanine-DNA methyltransferase.
     
 0.637
XRCC1
X-ray repair cross complementing 1.
    
 
 0.618
NTHL1
Nth like DNA glycosylase 1.
   
  
 0.592
OGG1
8-oxoguanine DNA glycosylase.
     
 0.580
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.