STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYF2SYF2 pre-mRNA splicing factor. (221 aa)    
Predicted Functional Partners:
XAB2
XPA binding protein 2.
    
 0.999
CDC5L
Cell division cycle 5 like.
    
 0.999
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.999
ENSSDAP00000005507
annotation not available
   
 0.999
YJU2
YJU2 splicing factor homolog.
    
 0.999
SRRM2
Serine/arginine repetitive matrix 2.
    
 0.999
CDC40
Cell division cycle 40.
    
 0.999
CWC15
CWC15 spliceosome associated protein homolog.
   
 0.999
BUD31
BUD31 homolog.
   
 0.999
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.999
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.