STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIPAP1GRIP1 associated protein 1. (841 aa)    
Predicted Functional Partners:
ENSSDAP00000021286
annotation not available
    
 0.995
RAB7A
RAB7A, member RAS oncogene family.
    
 0.961
VPS41
VPS41 subunit of HOPS complex.
    
 
 0.959
RMC1
Regulator of MON1-CCZ1.
    
 0.931
RAB9A
RAB9A, member RAS oncogene family.
    
 0.926
RAB9B
RAB9B, member RAS oncogene family.
    
 0.926
RAB7B
RAB7B, member RAS oncogene family.
    
 0.913
VPS39
VPS39 subunit of HOPS complex.
   
 
 0.799
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
    
 
 0.777
GDI2
GDP dissociation inhibitor 2.
   
 0.720
Your Current Organism:
Spermophilus dauricus
NCBI taxonomy Id: 99837
Other names: Citellus dauricus, Daurian ground squirrel, S. dauricus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.