STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUGGCNuclear GTPase, germinal center associated. (753 aa)    
Predicted Functional Partners:
GCLC
Glutamate-cysteine ligase catalytic subunit.
   
 0.585
HTRA4
HtrA serine peptidase 4.
   
  
 0.572
RASD1
Ras related dexamethasone induced 1.
   
 
 0.510
CCDC152
Coiled-coil domain containing 152.
   
  
 0.470
MS4A1
Membrane spanning 4-domains A1.
   
  
 0.470
AICDA
Activation induced cytidine deaminase.
   
  
 0.462
SLAMF7
SLAM family member 7.
      
 0.450
APOBEC3A
CMP/dCMP-type deaminase domain-containing protein.
      
 0.449
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
  
 0.404
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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