STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTRF1LRF_PROK_I domain-containing protein. (380 aa)    
Predicted Functional Partners:
MRRF
Mitochondrial ribosome recycling factor.
  
 
 0.802
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.792
HEMK1
HemK methyltransferase family member 1.
  
 
 0.769
NDUFAF7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
   
  
 0.756
ETFBKMT
Uncharacterized protein.
      
 0.754
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.733
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
 
 
 0.730
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.728
MRPL20
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.723
MRPL49
Uncharacterized protein.
   
 
 0.721
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (18%) [HD]