Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBLN4Cerebellin 4 precursor. (201 aa)    
Predicted Functional Partners:
TECTA
Tectorin alpha.
      
 0.647
NRXN1
Neurexin 1.
   
 
 0.578
IGDCC3
Immunoglobulin superfamily DCC subclass member 3.
   
  
 0.574
GRID2
Glutamate ionotropic receptor delta type subunit 2.
   
  
 0.518
SEC14L5
SEC14 like lipid binding 5.
   
  
 0.511
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
   
  
 0.496
MC3R
Melanocortin 3 receptor.
      
 0.461
LGI2
Leucine rich repeat LGI family member 2.
      
 0.450
NEO1
Neogenin 1.
   
  
 0.433
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.429
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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