STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF144BRBR-type E3 ubiquitin transferase. (391 aa)    
Predicted Functional Partners:
HSPH1
Heat shock protein family H (Hsp110) member 1.
      
 0.726
TMEM150A
Transmembrane protein 150A.
      
 0.726
RNFT2
Ring finger protein, transmembrane 2.
      
 0.701
RNFT1
Uncharacterized protein.
      
 0.636
RNF183
Ring finger protein 183.
   
 0.632
G1SK22_RABIT
Ubiquitin-like domain-containing protein.
    
 0.596
G1TZL0_RABIT
Ubiquitin-like domain-containing protein.
    
 0.596
DIMT1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
      
 0.592
BEND6
BEN domain containing 6.
      
 0.590
LANCL3
LanC like 3.
      
 0.587
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.