STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLX3T cell leukemia homeobox 3. (291 aa)    
Predicted Functional Partners:
PAX2
Paired box 2.
      
 0.774
LHX5
LIM homeobox 5.
  
 
 
 0.746
LHX1
LIM homeobox 1.
    
 
 0.735
PRDM13
PR/SET domain 13.
   
 
 0.720
OLIG3
Oligodendrocyte transcription factor 3.
      
 0.698
LMO1
LIM domain only 1.
    
 
 0.637
ISL1
ISL LIM homeobox 1.
   
 
 0.631
PHOX2B
Homeobox domain-containing protein.
   
  
 0.623
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
      
 0.622
LMO2
LIM domain only 2.
    
 
 0.593
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.