STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF38APre-mRNA processing factor 38A. (312 aa)    
Predicted Functional Partners:
MFAP1
Microfibrillar-associated protein 1 (Predicted).
   
 0.998
TCERG1
Transcription elongation regulator 1.
   
 0.995
ZMAT2
Zinc finger matrin-type 2.
   
 0.988
PLRG1
Pleiotropic regulator 1.
 
 
  0.964
PRPF8
Pre-mRNA processing factor 8.
    
 0.955
IK
IK cytokine.
   
 0.945
PRPF6
Pre-mRNA processing factor 6.
   
 0.942
SF3A3
Splicing factor 3a subunit 3.
   
 0.939
WBP4
WW domain binding protein 4.
   
 0.933
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.921
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.