Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXC11Homeobox C11. (303 aa)    
Predicted Functional Partners:
HOXD10
Homeobox domain-containing protein.
   
  
0.565
TTC22
Tetratricopeptide repeat domain 22.
      
 0.560
STMND1
Stathmin domain containing 1.
      
 0.560
HOXC4
Homeobox C4.
   
 
0.503
HOXC10
Homeobox C10.
   
  
0.480
PBX1
PBX homeobox 1.
    
 
 0.477
KIAA1958
KIAA1958.
    
 
 0.450
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
0.450
LRRC30
Leucine rich repeat containing 30.
   
  
 0.449
HOXB8
Homeobox B8.
   
 
 0.445
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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