STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC11Homeobox C11. (303 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
 
 0.554
HOXB8
Homeobox B8.
   
 
 0.528
HOXD10
Homeobox domain-containing protein.
   
  
0.490
LRRC30
Leucine rich repeat containing 30.
   
  
 0.488
HOXC4
Homeobox C4.
   
 
0.481
HOXC10
Homeobox C10.
   
  
0.466
HOXC6
Homeobox C6.
  
 
0.462
PBX2
PBX homeobox 2.
    
 
 0.446
HOXA10
Homeobox A10.
   
  
0.435
HOXA3
Homeobox domain-containing protein.
  
 
0.428
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.