Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APOBEC3A | SERINC4 | ENSOCUP00000017941 | ENSOCUP00000001009 | CMP/dCMP-type deaminase domain-containing protein. | Serine incorporator 4. | 0.441 |
APOBEC3A | TRIM5 | ENSOCUP00000017941 | ENSOCUP00000043699 | CMP/dCMP-type deaminase domain-containing protein. | Uncharacterized protein. | 0.642 |
CDK13 | SERINC4 | ENSOCUP00000014257 | ENSOCUP00000001009 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Serine incorporator 4. | 0.416 |
ICE2 | SERINC4 | ENSOCUP00000003593 | ENSOCUP00000001009 | Interactor of little elongation complex ELL subunit 2. | Serine incorporator 4. | 0.464 |
LOC100340649 | SERINC4 | ENSOCUP00000035226 | ENSOCUP00000001009 | CMP/dCMP-type deaminase domain-containing protein. | Serine incorporator 4. | 0.635 |
LOC100340649 | TRIM5 | ENSOCUP00000035226 | ENSOCUP00000043699 | CMP/dCMP-type deaminase domain-containing protein. | Uncharacterized protein. | 0.633 |
MFAP1 | SERF2 | ENSOCUP00000009224 | ENSOCUP00000034412 | Microfibrillar-associated protein 1 (Predicted). | Small EDRK-rich factor 2. | 0.717 |
MFAP1 | SERINC4 | ENSOCUP00000009224 | ENSOCUP00000001009 | Microfibrillar-associated protein 1 (Predicted). | Serine incorporator 4. | 0.649 |
RYR3 | SERINC4 | ENSOCUP00000045001 | ENSOCUP00000001009 | Ryanodine receptor 3; Calcium channel that mediates the release of Ca(2+) from the sarcoplasmic reticulum into the cytoplasm in muscle and thereby plays a role in triggering muscle contraction. May regulate Ca(2+) release by other calcium channels. Calcium channel that mediates Ca(2+)-induced Ca(2+) release from the endoplasmic reticulum in non-muscle cells. Plays a role in cellular calcium signaling. Contributes to cellular calcium ion homeostasis. Isoform 2 lacks a predicted transmembrane segment and does not form functional calcium channels by itself; however, it can form tetramers [...] | Serine incorporator 4. | 0.625 |
SERF2 | MFAP1 | ENSOCUP00000034412 | ENSOCUP00000009224 | Small EDRK-rich factor 2. | Microfibrillar-associated protein 1 (Predicted). | 0.717 |
SERF2 | SERINC4 | ENSOCUP00000034412 | ENSOCUP00000001009 | Small EDRK-rich factor 2. | Serine incorporator 4. | 0.700 |
SERINC4 | APOBEC3A | ENSOCUP00000001009 | ENSOCUP00000017941 | Serine incorporator 4. | CMP/dCMP-type deaminase domain-containing protein. | 0.441 |
SERINC4 | CDK13 | ENSOCUP00000001009 | ENSOCUP00000014257 | Serine incorporator 4. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.416 |
SERINC4 | ICE2 | ENSOCUP00000001009 | ENSOCUP00000003593 | Serine incorporator 4. | Interactor of little elongation complex ELL subunit 2. | 0.464 |
SERINC4 | LOC100340649 | ENSOCUP00000001009 | ENSOCUP00000035226 | Serine incorporator 4. | CMP/dCMP-type deaminase domain-containing protein. | 0.635 |
SERINC4 | MFAP1 | ENSOCUP00000001009 | ENSOCUP00000009224 | Serine incorporator 4. | Microfibrillar-associated protein 1 (Predicted). | 0.649 |
SERINC4 | RYR3 | ENSOCUP00000001009 | ENSOCUP00000045001 | Serine incorporator 4. | Ryanodine receptor 3; Calcium channel that mediates the release of Ca(2+) from the sarcoplasmic reticulum into the cytoplasm in muscle and thereby plays a role in triggering muscle contraction. May regulate Ca(2+) release by other calcium channels. Calcium channel that mediates Ca(2+)-induced Ca(2+) release from the endoplasmic reticulum in non-muscle cells. Plays a role in cellular calcium signaling. Contributes to cellular calcium ion homeostasis. Isoform 2 lacks a predicted transmembrane segment and does not form functional calcium channels by itself; however, it can form tetramers [...] | 0.625 |
SERINC4 | SERF2 | ENSOCUP00000001009 | ENSOCUP00000034412 | Serine incorporator 4. | Small EDRK-rich factor 2. | 0.700 |
SERINC4 | TRIM5 | ENSOCUP00000001009 | ENSOCUP00000043699 | Serine incorporator 4. | Uncharacterized protein. | 0.524 |
TRIM5 | APOBEC3A | ENSOCUP00000043699 | ENSOCUP00000017941 | Uncharacterized protein. | CMP/dCMP-type deaminase domain-containing protein. | 0.642 |
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