Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SFT2D1Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (199 aa)    
Predicted Functional Partners:
GOLT1B
Golgi transport 1B.
   
 
 0.622
KISS1
Uncharacterized protein.
   
 
 0.620
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate); Belongs to the syntaxin family.
    
 
 0.608
ARMCX4
Armadillo repeat containing X-linked 4.
      
 0.595
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.587
YKT6
Uncharacterized protein.
    
 
 0.574
LOC100348853
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.574
TMEM242
Uncharacterized protein.
      
 0.565
MAL2
Mal, T cell differentiation protein 2 (gene/pseudogene).
   
  
 0.563
CTDNEP1
CTD nuclear envelope phosphatase 1.
      
 0.560
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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