STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL11ABAF chromatin remodeling complex subunit BCL11A. (975 aa)    
Predicted Functional Partners:
GATA1
GATA binding protein 1.
    
 0.766
SOX6
SRY-box transcription factor 6.
    
 
 0.757
MTA1
Uncharacterized protein.
   
 0.734
HBS1L
HBS1_N domain-containing protein.
      
 0.707
KLF1
C2H2-type domain-containing protein.
   
 
 0.701
RBBP4
WD_REPEATS_REGION domain-containing protein.
    
 0.698
HDAC1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.693
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.683
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
   
 
 0.677
AHSP
Alpha hemoglobin stabilizing protein.
      
 0.675
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.