Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RBFOX1RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (369 aa)    
Predicted Functional Partners:
RBFOX2
RNA binding fox-1 homolog 2.
   
   0.974
RBFOX3
RRM domain-containing protein.
  
0.970
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.817
RBM24
RNA binding motif protein 24.
   
 
 0.796
QKI
QKI, KH domain containing RNA binding.
   
 
 0.782
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.777
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.746
ELAVL4
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.703
MECP2
Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC).
    
 0.691
NOVA2
NOVA alternative splicing regulator 2.
      
 0.690
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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