STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK1Uncharacterized protein. (1175 aa)    
Predicted Functional Partners:
INTS2
Integrator complex subunit 2.
      
 0.727
SLC45A4
Solute carrier family 45 member 4.
      
 0.697
WDR36
WD repeat domain 36.
 
   
  0.631
SSU72
Uncharacterized protein.
      
 0.600
CCDC148
Uncharacterized protein.
      
 0.561
SNAP47
Synaptosome associated protein 47.
   
 
 0.558
MGAM
Maltase-glucoamylase.
      
 0.550
GMDS
GDP-mannose 4,6-dehydratase.
      
 0.549
RALY
RALY heterogeneous nuclear ribonucleoprotein.
      
 0.525
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
    
 0.500
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.