Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC100343047 | LOC100345190 | ENSOCUP00000035405 | ENSOCUP00000040340 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.962 |
| LOC100343047 | MYSM1 | ENSOCUP00000035405 | ENSOCUP00000026655 | Ubiquitin-like domain-containing protein. | Myb like, SWIRM and MPN domains 1. | 0.971 |
| LOC100343047 | PARK2 | ENSOCUP00000035405 | ENSOCUP00000022026 | Ubiquitin-like domain-containing protein. | E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. | 0.974 |
| LOC100343047 | PINK1 | ENSOCUP00000035405 | ENSOCUP00000005454 | Ubiquitin-like domain-containing protein. | PTEN induced kinase 1. | 0.976 |
| LOC100343047 | UBA1 | ENSOCUP00000035405 | ENSOCUP00000007237 | Ubiquitin-like domain-containing protein. | Ubiquitin-like modifier-activating enzyme 1; Catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation through the ubiquitin-proteasome system. Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin-E1 thioester and free AMP. Essential for the formation of radiation-induced foci, timely DNA repair and for response to replication stress. Promotes the recruitment of TP53BP1 and BRCA1 at DNA damage sites (By similarity). | 0.976 |
| LOC100343047 | UBA7 | ENSOCUP00000035405 | ENSOCUP00000026535 | Ubiquitin-like domain-containing protein. | Ubiquitin like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. | 0.976 |
| LOC100343047 | UBB | ENSOCUP00000035405 | ENSOCUP00000001111 | Ubiquitin-like domain-containing protein. | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | 0.984 |
| LOC100343047 | UBE2L3 | ENSOCUP00000035405 | ENSOCUP00000002253 | Ubiquitin-like domain-containing protein. | Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. | 0.951 |
| LOC100343047 | UBE2L6 | ENSOCUP00000035405 | ENSOCUP00000020762 | Ubiquitin-like domain-containing protein. | Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. | 0.962 |
| LOC100343047 | UBXN7 | ENSOCUP00000035405 | ENSOCUP00000010586 | Ubiquitin-like domain-containing protein. | UBX domain-containing protein. | 0.949 |
| LOC100345190 | LOC100343047 | ENSOCUP00000040340 | ENSOCUP00000035405 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like domain-containing protein. | 0.962 |
| LOC100345190 | PARK2 | ENSOCUP00000040340 | ENSOCUP00000022026 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. | 0.978 |
| LOC100345190 | UBA1 | ENSOCUP00000040340 | ENSOCUP00000007237 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like modifier-activating enzyme 1; Catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation through the ubiquitin-proteasome system. Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin-E1 thioester and free AMP. Essential for the formation of radiation-induced foci, timely DNA repair and for response to replication stress. Promotes the recruitment of TP53BP1 and BRCA1 at DNA damage sites (By similarity). | 0.687 |
| LOC100345190 | UBA7 | ENSOCUP00000040340 | ENSOCUP00000026535 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. | 0.598 |
| LOC100345190 | UBB | ENSOCUP00000040340 | ENSOCUP00000001111 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11- [...] | 0.977 |
| LOC100345190 | UBE2L3 | ENSOCUP00000040340 | ENSOCUP00000002253 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. | 0.920 |
| LOC100345190 | UBE2L6 | ENSOCUP00000040340 | ENSOCUP00000020762 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. | 0.919 |
| LOC100345190 | UBXN7 | ENSOCUP00000040340 | ENSOCUP00000010586 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | UBX domain-containing protein. | 0.439 |
| MYSM1 | LOC100343047 | ENSOCUP00000026655 | ENSOCUP00000035405 | Myb like, SWIRM and MPN domains 1. | Ubiquitin-like domain-containing protein. | 0.971 |
| MYSM1 | UBA1 | ENSOCUP00000026655 | ENSOCUP00000007237 | Myb like, SWIRM and MPN domains 1. | Ubiquitin-like modifier-activating enzyme 1; Catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation through the ubiquitin-proteasome system. Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin-E1 thioester and free AMP. Essential for the formation of radiation-induced foci, timely DNA repair and for response to replication stress. Promotes the recruitment of TP53BP1 and BRCA1 at DNA damage sites (By similarity). | 0.486 |
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