STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1SF57_RABITBMERB domain-containing protein. (698 aa)    
Predicted Functional Partners:
MICAL2
Microtubule associated monooxygenase, calponin and LIM domain containing 2.
 
 
  
 0.912
GMCL1
BTB domain-containing protein.
      
 0.720
SPIN4
Spindlin family member 4.
      
 0.696
SPTBN4
Spectrin beta, non-erythrocytic 4.
   
 
 0.655
GASK1B
Golgi associated kinase 1B.
   
  
 0.650
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.627
ENSOCUP00000047551
Uncharacterized protein.
   
 
 0.627
RAB10
RAB10, member RAS oncogene family.
   
 
 0.599
LRRN4
Leucine rich repeat neuronal 4.
    
 
 0.568
NCKAP1L
NCK associated protein 1 like.
      
 0.525
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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