Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
G1SF57_RABITBMERB domain-containing protein. (698 aa)    
Predicted Functional Partners:
MICAL2
Microtubule associated monooxygenase, calponin and LIM domain containing 2.
 
    
 0.910
RAB10
RAB10, member RAS oncogene family.
   
 0.831
C6orf132
Chromosome 6 open reading frame 132.
    
 
 0.649
GMCL1
BTB domain-containing protein.
      
 0.640
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.628
SPIN4
Spindlin family member 4.
      
 0.608
RAB13
Uncharacterized protein.
   
 0.570
UHRF1BP1
UHRF1 binding protein 1.
      
 0.560
RAB8B
RAB8B, member RAS oncogene family.
   
 0.543
ENSOCUP00000047551
Uncharacterized protein.
   
 0.543
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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