Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGXT | CBS | ENSOCUP00000022506 | ENSOCUP00000034549 | Serine--pyruvate aminotransferase. | Cystathionine beta-synthase; Hydro-lyase catalyzing the first step of the transsulfuration pathway, where the hydroxyl group of L-serine is displaced by L- homocysteine in a beta-replacement reaction to form L-cystathionine, the precursor of L-cysteine. This catabolic route allows the elimination of L-methionine and the toxic metabolite L-homocysteine (By similarity). Also involved in the production of hydrogen sulfide, a gasotransmitter with signaling and cytoprotective effects on neurons (By similarity). | 0.951 |
| AGXT | SHMT1 | ENSOCUP00000022506 | ENSOCUP00000017814 | Serine--pyruvate aminotransferase. | Serine hydroxymethyltransferase, cytosolic; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.991 |
| AGXT | SPTLC1 | ENSOCUP00000022506 | ENSOCUP00000030336 | Serine--pyruvate aminotransferase. | Serine palmitoyltransferase long chain base subunit 1. | 0.858 |
| AGXT | SPTLC2 | ENSOCUP00000022506 | ENSOCUP00000040528 | Serine--pyruvate aminotransferase. | Serine palmitoyltransferase long chain base subunit 2. | 0.858 |
| AGXT | SPTLC3 | ENSOCUP00000022506 | ENSOCUP00000001125 | Serine--pyruvate aminotransferase. | Serine palmitoyltransferase long chain base subunit 3. | 0.859 |
| CBS | AGXT | ENSOCUP00000034549 | ENSOCUP00000022506 | Cystathionine beta-synthase; Hydro-lyase catalyzing the first step of the transsulfuration pathway, where the hydroxyl group of L-serine is displaced by L- homocysteine in a beta-replacement reaction to form L-cystathionine, the precursor of L-cysteine. This catabolic route allows the elimination of L-methionine and the toxic metabolite L-homocysteine (By similarity). Also involved in the production of hydrogen sulfide, a gasotransmitter with signaling and cytoprotective effects on neurons (By similarity). | Serine--pyruvate aminotransferase. | 0.951 |
| CBS | SHMT1 | ENSOCUP00000034549 | ENSOCUP00000017814 | Cystathionine beta-synthase; Hydro-lyase catalyzing the first step of the transsulfuration pathway, where the hydroxyl group of L-serine is displaced by L- homocysteine in a beta-replacement reaction to form L-cystathionine, the precursor of L-cysteine. This catabolic route allows the elimination of L-methionine and the toxic metabolite L-homocysteine (By similarity). Also involved in the production of hydrogen sulfide, a gasotransmitter with signaling and cytoprotective effects on neurons (By similarity). | Serine hydroxymethyltransferase, cytosolic; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.973 |
| CBS | SPTLC1 | ENSOCUP00000034549 | ENSOCUP00000030336 | Cystathionine beta-synthase; Hydro-lyase catalyzing the first step of the transsulfuration pathway, where the hydroxyl group of L-serine is displaced by L- homocysteine in a beta-replacement reaction to form L-cystathionine, the precursor of L-cysteine. This catabolic route allows the elimination of L-methionine and the toxic metabolite L-homocysteine (By similarity). Also involved in the production of hydrogen sulfide, a gasotransmitter with signaling and cytoprotective effects on neurons (By similarity). | Serine palmitoyltransferase long chain base subunit 1. | 0.852 |
| CBS | SPTLC2 | ENSOCUP00000034549 | ENSOCUP00000040528 | Cystathionine beta-synthase; Hydro-lyase catalyzing the first step of the transsulfuration pathway, where the hydroxyl group of L-serine is displaced by L- homocysteine in a beta-replacement reaction to form L-cystathionine, the precursor of L-cysteine. This catabolic route allows the elimination of L-methionine and the toxic metabolite L-homocysteine (By similarity). Also involved in the production of hydrogen sulfide, a gasotransmitter with signaling and cytoprotective effects on neurons (By similarity). | Serine palmitoyltransferase long chain base subunit 2. | 0.852 |
| CBS | SPTLC3 | ENSOCUP00000034549 | ENSOCUP00000001125 | Cystathionine beta-synthase; Hydro-lyase catalyzing the first step of the transsulfuration pathway, where the hydroxyl group of L-serine is displaced by L- homocysteine in a beta-replacement reaction to form L-cystathionine, the precursor of L-cysteine. This catabolic route allows the elimination of L-methionine and the toxic metabolite L-homocysteine (By similarity). Also involved in the production of hydrogen sulfide, a gasotransmitter with signaling and cytoprotective effects on neurons (By similarity). | Serine palmitoyltransferase long chain base subunit 3. | 0.853 |
| KDSR | ORMDL1 | ENSOCUP00000012169 | ENSOCUP00000010760 | 3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Uncharacterized protein. | 0.504 |
| KDSR | SPTLC1 | ENSOCUP00000012169 | ENSOCUP00000030336 | 3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Serine palmitoyltransferase long chain base subunit 1. | 0.998 |
| KDSR | SPTLC2 | ENSOCUP00000012169 | ENSOCUP00000040528 | 3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Serine palmitoyltransferase long chain base subunit 2. | 0.992 |
| KDSR | SPTLC3 | ENSOCUP00000012169 | ENSOCUP00000001125 | 3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Serine palmitoyltransferase long chain base subunit 3. | 0.992 |
| KDSR | SPTSSA | ENSOCUP00000012169 | ENSOCUP00000019035 | 3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Uncharacterized protein. | 0.421 |
| ORMDL1 | KDSR | ENSOCUP00000010760 | ENSOCUP00000012169 | Uncharacterized protein. | 3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.504 |
| ORMDL1 | SPTLC1 | ENSOCUP00000010760 | ENSOCUP00000030336 | Uncharacterized protein. | Serine palmitoyltransferase long chain base subunit 1. | 0.955 |
| ORMDL1 | SPTLC2 | ENSOCUP00000010760 | ENSOCUP00000040528 | Uncharacterized protein. | Serine palmitoyltransferase long chain base subunit 2. | 0.895 |
| ORMDL1 | SPTLC3 | ENSOCUP00000010760 | ENSOCUP00000001125 | Uncharacterized protein. | Serine palmitoyltransferase long chain base subunit 3. | 0.894 |
| ORMDL1 | SPTSSA | ENSOCUP00000010760 | ENSOCUP00000019035 | Uncharacterized protein. | Uncharacterized protein. | 0.724 |
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