STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP53I11Tumor protein p53 inducible protein 11. (189 aa)    
Predicted Functional Partners:
PWWP3B
PWWP domain containing 3B.
   
  
 0.699
EFCAB10
EF-hand calcium binding domain 10.
      
 0.697
ZNF467
Zinc finger protein 467.
      
 0.595
TP53INP2
Uncharacterized protein.
      
 0.568
COLCA2
Colorectal cancer associated 2.
      
 0.568
TMED7
GOLD domain-containing protein.
      
 0.529
GADD45GIP1
GADD45G interacting protein 1.
      
 0.526
GLCCI1
Uncharacterized protein.
      
 0.495
CDK20
Cyclin dependent kinase 20; Belongs to the protein kinase superfamily.
      
 0.457
CAP1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
      
 0.457
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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