G1SF96_RABIT protein (Oryctolagus cuniculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G1SF96_RABIT

Ig-like domain-containing protein. (218 aa)

Predicted Functional Partners:

G1SK63_RABIT

0.679

JCHAIN

0.664

ALB

0.657

LOC100359306

0.441

RANBP9

0.424

LYN

0.418

G1TY57_RABIT

0.409

G1TZI0_RABIT

0.409

IGHA_RABIT

0.409

CD79B

0.400

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALB	G1SF96_RABIT	ENSOCUP00000014006	ENSOCUP00000001173	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. Major zinc transporter in plasma, typically binds about 80% of all plasma zinc (By similarity). Major calcium and magnesium transporter in plasma, binds approximately 45% of circulating calcium and magnesium in plasma (By similarity). Potentially has more than two calcium-binding sites and might additionally bind calcium in a non-specific manner (B [...]	Ig-like domain-containing protein.	0.657
CD79B	G1SF96_RABIT	ENSOCUP00000033012	ENSOCUP00000001173	CD79b molecule.	Ig-like domain-containing protein.	0.400
CD79B	JCHAIN	ENSOCUP00000033012	ENSOCUP00000023316	CD79b molecule.	Immunoglobulin J chain; Serves to link two monomer units of either IgM or IgA. In the case of IgM, the J chain-joined dimer is a nucleating unit for the IgM pentamer, and in the case of IgA it induces larger polymers. It also help to bind these immunoglobulins to secretory component.	0.830
CD79B	LYN	ENSOCUP00000033012	ENSOCUP00000002661	CD79b molecule.	Tyrosine-protein kinase.	0.966
G1SF96_RABIT	ALB	ENSOCUP00000001173	ENSOCUP00000014006	Ig-like domain-containing protein.	Serum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. Major zinc transporter in plasma, typically binds about 80% of all plasma zinc (By similarity). Major calcium and magnesium transporter in plasma, binds approximately 45% of circulating calcium and magnesium in plasma (By similarity). Potentially has more than two calcium-binding sites and might additionally bind calcium in a non-specific manner (B [...]	0.657
G1SF96_RABIT	CD79B	ENSOCUP00000001173	ENSOCUP00000033012	Ig-like domain-containing protein.	CD79b molecule.	0.400
G1SF96_RABIT	G1SK63_RABIT	ENSOCUP00000001173	ENSOCUP00000003180	Ig-like domain-containing protein.	Uncharacterized protein.	0.679
G1SF96_RABIT	G1TY57_RABIT	ENSOCUP00000001173	ENSOCUP00000022018	Ig-like domain-containing protein.	Uncharacterized protein.	0.409
G1SF96_RABIT	G1TZI0_RABIT	ENSOCUP00000001173	ENSOCUP00000022503	Ig-like domain-containing protein.	Uncharacterized protein.	0.409
G1SF96_RABIT	IGHA_RABIT	ENSOCUP00000001173	ENSOCUP00000043537	Ig-like domain-containing protein.	Ig alpha chain C region; Ig alpha is the major immunoglobulin class in body secretions. It may serve both to defend against local infection and to prevent access of foreign antigens to the general immunologic system.	0.409
G1SF96_RABIT	JCHAIN	ENSOCUP00000001173	ENSOCUP00000023316	Ig-like domain-containing protein.	Immunoglobulin J chain; Serves to link two monomer units of either IgM or IgA. In the case of IgM, the J chain-joined dimer is a nucleating unit for the IgM pentamer, and in the case of IgA it induces larger polymers. It also help to bind these immunoglobulins to secretory component.	0.664
G1SF96_RABIT	LOC100359306	ENSOCUP00000001173	ENSOCUP00000039486	Ig-like domain-containing protein.	Uncharacterized protein.	0.441
G1SF96_RABIT	LYN	ENSOCUP00000001173	ENSOCUP00000002661	Ig-like domain-containing protein.	Tyrosine-protein kinase.	0.418
G1SF96_RABIT	RANBP9	ENSOCUP00000001173	ENSOCUP00000034926	Ig-like domain-containing protein.	RAN binding protein 9.	0.424
G1SK63_RABIT	G1SF96_RABIT	ENSOCUP00000003180	ENSOCUP00000001173	Uncharacterized protein.	Ig-like domain-containing protein.	0.679
G1SK63_RABIT	G1TY57_RABIT	ENSOCUP00000003180	ENSOCUP00000022018	Uncharacterized protein.	Uncharacterized protein.	0.522
G1SK63_RABIT	G1TZI0_RABIT	ENSOCUP00000003180	ENSOCUP00000022503	Uncharacterized protein.	Uncharacterized protein.	0.525
G1SK63_RABIT	IGHA_RABIT	ENSOCUP00000003180	ENSOCUP00000043537	Uncharacterized protein.	Ig alpha chain C region; Ig alpha is the major immunoglobulin class in body secretions. It may serve both to defend against local infection and to prevent access of foreign antigens to the general immunologic system.	0.521
G1SK63_RABIT	JCHAIN	ENSOCUP00000003180	ENSOCUP00000023316	Uncharacterized protein.	Immunoglobulin J chain; Serves to link two monomer units of either IgM or IgA. In the case of IgM, the J chain-joined dimer is a nucleating unit for the IgM pentamer, and in the case of IgA it induces larger polymers. It also help to bind these immunoglobulins to secretory component.	0.437
G1SK63_RABIT	LOC100359306	ENSOCUP00000003180	ENSOCUP00000039486	Uncharacterized protein.	Uncharacterized protein.	0.795