Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LINGO4Leucine rich repeat and Ig domain containing 4. (629 aa)    
Predicted Functional Partners:
LRRC10
Uncharacterized protein.
  
    0.498
LRRC18
Leucine rich repeat containing 18.
  
     0.492
LOC100346323
Uncharacterized protein.
    
  0.479
LRRC30
Leucine rich repeat containing 30.
  
     0.465
LRRC28
Leucine rich repeat containing 28.
  
 
 0.441
LRRC8E
Leucine rich repeat containing 8 VRAC subunit E.
  
     0.440
AK9
Uncharacterized protein.
    
  0.435
LRRC39
Leucine rich repeat containing 39.
  
     0.429
U3KN95_RABIT
Uncharacterized protein.
  
     0.427
LRRC2
Leucine rich repeat containing 2.
  
     0.420
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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