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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF274Zinc finger protein 274. (609 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
  0.908
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.867
TRIM28
Tripartite motif containing 28.
   
 0.832
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.588
USF1
Upstream stimulatory factor 1; Transcription factor that binds to a symmetrical DNA sequence (E-boxes) (5'-CACGTG-3') that is found in a variety of viral and cellular promoters. Regulates the expression of the surfactant protein- A (SP-A) gene.
    
 0.505
TAF7
TATA-box binding protein associated factor 7.
    
 
 0.493
MXI1
MAX interactor 1, dimerization protein.
   
 
 0.481
ANKRD11
Uncharacterized protein.
    
 0.475
ZSCAN18
Zinc finger and SCAN domain containing 18.
   
  
0.474
USF2
Upstream transcription factor 2, c-fos interacting.
    
 0.469
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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